EnhancerDB
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  3. rs140522648[chr1:117416987]
Enhancers that have rs140522648[chr1:117416987]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs140522648[chr1:117416987]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117416313 117417342 ZNF274 GTRD no Bone Marrow (K562) 21334018
chr1 117416467 117417228 ZNF274 GTRD no Bone Marrow (K562) 21334020
chr1 117416488 117417125 ZNF274 GTRD no Bone Marrow (K562) 21334021
chr1 117416590 117417262 ZNF274 GTRD no Bone Marrow (K562) 21334023
chr1 117416774 117417039 ZNF274 GTRD no Blood (GM12878) 21334024
chr1 117416981 117416996 HNF4A JASPAR yes 31847259
chr1 117416982 117416996 RXRG JASPAR yes 31847260
chr1 117416982 117416997 HNF4G JASPAR yes 31847261
chr1 117416982 117416997 NR2C2 JASPAR yes 31847262
chr1 117416986 117416992 SOX10 JASPAR yes 31847263
Genes associated with rs140522648[chr1:117416987], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More