EnhancerDB
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  3. rs140561394[chr12:125203829]
Enhancers that have rs140561394[chr12:125203829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140561394[chr12:125203829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125202604 125203994 ZBTB33 GTRD no Lung (A549) 21582256
chr12 125202705 125203880 ZNF274 GTRD no Cervix (HeLa-S3) 21582257
chr12 125202790 125204065 ZBTB33 GTRD no Lung (A549) 21582259
chr12 125203588 125204028 ZNF274 GTRD no Liver (HepG2) 21582305
chr12 125203628 125204101 ZNF274 GTRD no Liver (HepG2) 21582306
chr12 125203671 125204675 AR GTRD no Prostate (PC-3) 21582307
chr12 125203702 125204079 ZNF274 GTRD no Liver (HepG2) 21582308
chr12 125203761 125204279 ZNF274 GTRD no Bone Marrow (K562) 21582309
chr12 125203813 125203833 TP63 JASPAR yes 124413093
chr12 125203814 125203832 TP73 JASPAR yes 124413098
chr12 125203827 125203832 SP1 TRANSFAC yes 124413099
chr12 125203828 125203849 ZNF263 JASPAR yes 124413100
Genes associated with rs140561394[chr12:125203829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More