EnhancerDB
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  3. rs140568259[chr6:108898445]
Enhancers that have rs140568259[chr6:108898445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140568259[chr6:108898445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108898432 108898452 TP53 JASPAR yes 104179276
chr6 108898435 108898446 STAT1 JASPAR yes 104179277
chr6 108898435 108898446 STAT3 JASPAR yes 104179278
chr6 108898436 108898451 HSF1 JASPAR yes 104179279
chr6 108898444 108898459 HNF4A JASPAR yes 104179280
Genes associated with rs140568259[chr6:108898445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More