EnhancerDB
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  3. rs140613621[chr12:125260489]
Enhancers that have rs140613621[chr12:125260489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140613621[chr12:125260489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125260191 125260847 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21583107
chr12 125260215 125260791 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21583108
chr12 125260309 125260649 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583109
chr12 125260321 125260645 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21583110
chr12 125260344 125260624 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21583111
chr12 125260346 125260690 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583112
chr12 125260354 125260576 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583113
chr12 125260388 125260580 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21583114
chr12 125260419 125260536 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583115
chr12 125260442 125260517 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21583116
chr12 125260443 125260523 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21583117
chr12 125260482 125260496 JUN JASPAR yes 124420931
chr12 125260483 125260493 HOXA2 JASPAR yes 124420932
chr12 125260483 125260493 MEOX1 JASPAR yes 124420933
chr12 125260484 125260495 BATF JASPAR yes 124420934
chr12 125260485 125260496 JUNB JASPAR yes 124420935
chr12 125260486 125260497 FOS JASPAR yes 124420936
chr12 125260486 125260497 FOSL1 JASPAR yes 124420937
chr12 125260487 125260496 JDP2 JASPAR yes 124420938
chr12 125260488 125260499 BATF JASPAR yes 124420939
Genes associated with rs140613621[chr12:125260489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More