EnhancerDB
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  3. rs140670041[chr1:90375024]
Enhancers that have rs140670041[chr1:90375024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90347765 90388035 enh484
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 90374317 90375036 vista2407
VISTA
Transcript factors that have rs140670041[chr1:90375024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90374437 90375087 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813846
chr1 90374560 90375100 EP300 UCSC Txn Factor no Conserved 107813852
chr1 90374560 90375100 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813853
chr1 90374573 90375089 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813854
chr1 90374577 90375107 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813855
chr1 90374684 90375024 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813867
chr1 90375017 90375029 YY1 JASPAR yes 30633323
chr1 90375017 90375029 YY1 JASPAR yes 118326454
chr1 90375019 90375040 IRF1 JASPAR yes 30633324
chr1 90375019 90375040 IRF1 JASPAR yes 118326455
chr1 90375022 90375026 YY1 TRANSFAC yes 30633325
chr1 90375022 90375026 YY1 TRANSFAC yes 118326456
chr1 90375024 90375039 FOXP1 JASPAR yes 30633326
chr1 90375024 90375039 FOXP1 JASPAR yes 118326457
Genes associated with rs140670041[chr1:90375024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More