EnhancerDB
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  3. rs140752620[chr12:65052544]
Enhancers that have rs140752620[chr12:65052544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140752620[chr12:65052544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65052524 65052545 IRF1 JASPAR yes 121422186
chr12 65052528 65052546 IRF2 JASPAR yes 121422193
chr12 65052541 65052545 NFE TRANSFAC yes 121422195
chr12 65052541 65052546 GATA1 TRANSFAC yes 121422196
chr12 65052541 65052547 GATA3 JASPAR yes 121422197
Genes associated with rs140752620[chr12:65052544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More