EnhancerDB
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  3. rs140886202[chr5:173200419]
Enhancers that have rs140886202[chr5:173200419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140886202[chr5:173200419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173200417 173200429 BHLHE23 JASPAR yes 67903158
chr5 173200417 173200429 PKNOX2 JASPAR yes 67903159
chr5 173200418 173200428 BHLHE22 JASPAR yes 67903160
chr5 173200418 173200428 NEUROD2 JASPAR yes 67903161
chr5 173200418 173200428 NEUROG2 JASPAR yes 67903162
chr5 173200418 173200428 OLIG1 JASPAR yes 67903163
chr5 173200418 173200428 OLIG2 JASPAR yes 67903164
chr5 173200418 173200428 OLIG3 JASPAR yes 67903165
Genes associated with rs140886202[chr5:173200419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More