EnhancerDB
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  3. rs140941249[chr17:779438]
Enhancers that have rs140941249[chr17:779438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs140941249[chr17:779438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 779420 779441 IRF1 JASPAR yes 52635554
chr17 779422 779443 ZNF263 JASPAR yes 52635555
chr17 779423 779444 IRF1 JASPAR yes 52635556
chr17 779424 779439 FOXP1 JASPAR yes 52635557
chr17 779427 779448 IRF1 JASPAR yes 52635558
chr17 779428 779443 FOXP1 JASPAR yes 52635559
chr17 779428 779449 IRF1 JASPAR yes 52635560
chr17 779432 779453 IRF1 JASPAR yes 52635561
chr17 779433 779448 FOXP1 JASPAR yes 52635562
chr17 779436 779450 STAT1 JASPAR yes 52635563
chr17 779436 779451 STAT2 JASPAR yes 52635564
Genes associated with rs140941249[chr17:779438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More