EnhancerDB
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  3. rs140990296[chr5:79483974]
Enhancers that have rs140990296[chr5:79483974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140990296[chr5:79483974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79483960 79483979 REST JASPAR yes 63703852
chr5 79483962 79483978 ZNF143 JASPAR yes 63703853
chr5 79483970 79483975 SP1 TRANSFAC yes 63703854
chr5 79483970 79483979 HIC2 JASPAR yes 63703855
chr5 79483973 79483977 LFA1 TRANSFAC yes 63703856
chr5 79483974 79483984 ID4 JASPAR yes 63703857
chr5 79483974 79483984 TCF3 JASPAR yes 63703858
chr5 79483974 79483984 TCF4 JASPAR yes 63703859
Genes associated with rs140990296[chr5:79483974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More