EnhancerDB
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  3. rs140992964[chr1:39664583]
Enhancers that have rs140992964[chr1:39664583]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140992964[chr1:39664583]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39664576 39664587 NFIL3 JASPAR yes 28266380
chr1 39664578 39664591 POU3F3 JASPAR yes 28266381
chr1 39664578 39664592 POU1F1 JASPAR yes 28266382
chr1 39664579 39664594 FOXA1 JASPAR yes 28266383
chr1 39664579 39664594 MEF2A JASPAR yes 28266384
chr1 39664580 39664591 FOXB1 JASPAR yes 28266385
chr1 39664580 39664591 FOXC1 JASPAR yes 28266386
chr1 39664580 39664592 FOXC2 JASPAR yes 28266387
chr1 39664580 39664592 MEF2A JASPAR yes 28266388
chr1 39664581 39664591 MEF2A JASPAR yes 28266389
chr1 39664581 39664593 FOXI1 JASPAR yes 28266390
chr1 39664582 39664586 TEAD2 TRANSFAC yes 28266391
chr1 39664582 39664587 TBP TRANSFAC yes 28266392
chr1 39664582 39664588 TMF TRANSFAC yes 28266393
Genes associated with rs140992964[chr1:39664583], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More