EnhancerDB
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  3. rs141086401[chr17:46080394]
Enhancers that have rs141086401[chr17:46080394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46058151 46084696 enh4448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs141086401[chr17:46080394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267670
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267671
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267672
chr17 46079840 46080500 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767362
chr17 46079840 46080500 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108267677
chr17 46079840 46080500 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108267678
chr17 46079877 46080397 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767364
chr17 46079877 46080397 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108267680
chr17 46079892 46080412 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767366
chr17 46079892 46080412 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108267683
chr17 46079952 46080488 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108267692
chr17 46079952 46080488 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108267693
chr17 46079994 46080430 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767381
chr17 46079994 46080430 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108267704
chr17 46080000 46080410 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767382
chr17 46080000 46080410 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108267705
chr17 46080340 46080563 GATA2 UCSC Txn Factor no Conserved 108267722
chr17 46080354 46081237 ZNF274 GTRD no Liver (HepG2) 108267723
chr17 46080375 46081147 ZNF274 GTRD no Liver (HepG2) 108267724
chr17 46080378 46080399 IRF1 JASPAR yes 54551660
chr17 46080382 46080397 PRDM1 JASPAR yes 54551661
chr17 46080382 46080397 STAT2 JASPAR yes 54551662
chr17 46080383 46080395 IRF1 JASPAR yes 54551663
chr17 46080388 46080406 NFYA JASPAR yes 54551665
chr17 46080393 46080403 LHX6 JASPAR yes 54551666
Genes associated with rs141086401[chr17:46080394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More