EnhancerDB
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  3. rs141088653[chr17:43252215]
Enhancers that have rs141088653[chr17:43252215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs141088653[chr17:43252215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43252197 43252217 RREB1 JASPAR yes 54433272
chr17 43252200 43252215 FOXP1 JASPAR yes 54433274
chr17 43252200 43252221 IRF1 JASPAR yes 54433275
chr17 43252201 43252222 IRF1 JASPAR yes 54433276
chr17 43252202 43252217 FOXP1 JASPAR yes 54433277
chr17 43252202 43252223 IRF1 JASPAR yes 54433278
chr17 43252203 43252218 FOXP1 JASPAR yes 54433279
chr17 43252204 43252219 FOXP1 JASPAR yes 54433280
chr17 43252204 43252225 IRF1 JASPAR yes 54433281
chr17 43252205 43252220 FOXP1 JASPAR yes 54433282
chr17 43252205 43252226 IRF1 JASPAR yes 54433283
chr17 43252206 43252221 FOXP1 JASPAR yes 54433284
chr17 43252206 43252227 IRF1 JASPAR yes 54433285
chr17 43252207 43252222 FOXP1 JASPAR yes 54433286
chr17 43252209 43252224 FOXP1 JASPAR yes 54433287
chr17 43252210 43252231 IRF1 JASPAR yes 54433288
chr17 43252211 43252226 FOXP1 JASPAR yes 54433289
chr17 43252211 43252232 IRF1 JASPAR yes 54433290
chr17 43252212 43252233 IRF1 JASPAR yes 54433291
Genes associated with rs141088653[chr17:43252215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More