EnhancerDB
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  3. rs141545816[chr6:108910678]
Enhancers that have rs141545816[chr6:108910678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 108909808 108911282 vista1486
VISTA
Transcript factors that have rs141545816[chr6:108910678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108910473 108910757 FOXA1 UCSC Txn Factor no Conserved 107693954
chr6 108910473 108910773 NR3C1 UCSC Txn Factor no Conserved 107693955
chr6 108910549 108910985 ELF1 UCSC Txn Factor no Conserved 107693956
chr6 108910674 108910690 SOX4 JASPAR yes 22274532
chr6 108910674 108910690 SOX4 JASPAR yes 104180913
Genes associated with rs141545816[chr6:108910678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More