EnhancerDB
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  3. rs141843678[chr1:171403448]
Enhancers that have rs141843678[chr1:171403448]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs141843678[chr1:171403448]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171402798 171404004 ZNF143 GTRD no Epithelial (MCF-7) 21349655
chr1 171402799 171405826 ZNF143 GTRD no Epithelial (MCF-7) 21349656
chr1 171402799 171405826 ZNF143 GTRD no Epithelial (MCF-7) 107845400
chr1 171402805 171403878 ZNF143 GTRD no Epithelial (MCF-7) 21349657
chr1 171402831 171403900 ZNF143 GTRD no Epithelial (MCF-7) 21349658
chr1 171402839 171403973 ZNF143 GTRD no Epithelial (MCF-7) 21349659
chr1 171402951 171403767 ZNF143 GTRD no Epithelial (MCF-7) 21349660
chr1 171402981 171403842 ZNF143 GTRD no Epithelial (MCF-7) 21349661
chr1 171403036 171403996 ZNF274 GTRD no Cervix (HeLa-S3) 21349662
chr1 171403036 171404057 ZNF274 GTRD no Cervix (HeLa-S3) 21349663
chr1 171403101 171403766 ZNF143 GTRD no Epithelial (MCF-7) 21349664
chr1 171403154 171403790 ZNF143 GTRD no Epithelial (MCF-7) 21349665
chr1 171403186 171403944 ZNF143 GTRD no Epithelial (MCF-7) 21349666
chr1 171403200 171403912 ZNF143 GTRD no Epithelial (MCF-7) 21349667
chr1 171403251 171404009 ZNF274 GTRD no Cervix (HeLa-S3) 21349668
chr1 171403268 171403764 ZNF143 GTRD no Epithelial (MCF-7) 21349669
chr1 171403274 171403841 ZNF143 GTRD no Epithelial (MCF-7) 21349670
chr1 171403336 171403741 ZNF143 GTRD no Epithelial (MCF-7) 21349671
chr1 171403341 171403701 TCF7L2 GTRD no Colon (HCT116) 21349672
chr1 171403381 171403824 ZNF143 GTRD no Epithelial (MCF-7) 21349673
chr1 171403430 171403883 TCF7L2 GTRD no Colon (HCT116) 21349674
chr1 171403436 171403457 IRF1 JASPAR yes 33080452
chr1 171403438 171403453 PRDM1 JASPAR yes 33080453
chr1 171403440 171403461 IRF1 JASPAR yes 33080454
chr1 171403444 171403465 IRF1 JASPAR yes 33080455
chr1 171403446 171403461 STAT2 JASPAR yes 33080456
chr1 171403447 171403461 STAT1 JASPAR yes 33080457
Genes associated with rs141843678[chr1:171403448], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More