EnhancerDB
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  3. rs141988379[chr1:8428004]
Enhancers that have rs141988379[chr1:8428004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs141988379[chr1:8428004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8427994 8428004 BARHL2 JASPAR yes 26543973
chr1 8427994 8428012 MAFF JASPAR yes 26543974
chr1 8427996 8428007 NRL JASPAR yes 26543975
chr1 8428003 8428015 PKNOX1 JASPAR yes 26543976
chr1 8428003 8428015 PKNOX2 JASPAR yes 26543977
Genes associated with rs141988379[chr1:8428004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More