EnhancerDB
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  3. rs142019623[chr1:23440374]
Enhancers that have rs142019623[chr1:23440374]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs142019623[chr1:23440374]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23440366 23440381 MEF2C JASPAR yes 27413851
chr1 23440369 23440390 IRF1 JASPAR yes 27413852
chr1 23440373 23440388 FOXP1 JASPAR yes 27413853
chr1 23440373 23440394 IRF1 JASPAR yes 27413854
chr1 23440374 23440389 FOXP1 JASPAR yes 27413855
chr1 23440374 23440395 IRF1 JASPAR yes 27413856
Genes associated with rs142019623[chr1:23440374], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More