EnhancerDB
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  3. rs142038636[chr17:80483242]
Enhancers that have rs142038636[chr17:80483242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142038636[chr17:80483242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
Genes associated with rs142038636[chr17:80483242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 79858841 79869340 - PCYT2 ENSG00000185813.6 79869340 613902 Breast 0.0394397 16372
chr17 79858841 79869340 - PCYT2 ENSG00000185813.6 79869340 613902 Ovary 0.202064 16372