EnhancerDB
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  3. rs142069811[chr1:235096148]
Enhancers that have rs142069811[chr1:235096148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142069811[chr1:235096148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235095722 235096456 ZNF274 GTRD no Liver (HepG2) 21401463
chr1 235095742 235096357 ZNF274 GTRD no Liver (HepG2) 21401464
chr1 235095769 235096457 ZNF274 GTRD no Liver (HepG2) 21401465
chr1 235095776 235096417 ZNF274 GTRD no Liver (HepG2) 21401466
chr1 235095837 235096424 ZNF274 GTRD no Liver (HepG2) 21401467
chr1 235095895 235096407 ZNF143 GTRD no Epithelial (MCF-7) 21401468
chr1 235095995 235096410 ZNF143 GTRD no Epithelial (MCF-7) 21401469
chr1 235096134 235096148 TLX1 JASPAR yes 36334950
Genes associated with rs142069811[chr1:235096148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More