EnhancerDB
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  3. rs142078874[chr1:235159710]
Enhancers that have rs142078874[chr1:235159710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs142078874[chr1:235159710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235159295 235159730 ZNF274 GTRD no Bone Marrow (K562) 21403232
chr1 235159705 235159715 EN2 JASPAR yes 36343839
chr1 235159705 235159715 ESX1 JASPAR yes 36343840
chr1 235159705 235159715 GBX1 JASPAR yes 36343841
chr1 235159705 235159715 GBX2 JASPAR yes 36343842
chr1 235159705 235159715 GSX2 JASPAR yes 36343843
chr1 235159705 235159715 HESX1 JASPAR yes 36343844
chr1 235159705 235159715 HOXB3 JASPAR yes 36343845
chr1 235159705 235159715 LBX2 JASPAR yes 36343846
chr1 235159705 235159715 LHX2 JASPAR yes 36343847
chr1 235159705 235159715 MIXL1 JASPAR yes 36343848
chr1 235159705 235159715 MNX1 JASPAR yes 36343849
chr1 235159705 235159715 RAX JASPAR yes 36343850
chr1 235159706 235159710 H1TF2 TRANSFAC yes 36343851
chr1 235159706 235159710 NFE TRANSFAC yes 36343852
chr1 235159706 235159710 SRF TRANSFAC yes 36343853
chr1 235159706 235159714 BARX1 JASPAR yes 36343854
chr1 235159706 235159714 BSX JASPAR yes 36343855
chr1 235159706 235159714 DLX6 JASPAR yes 36343856
chr1 235159706 235159714 ISX JASPAR yes 36343857
chr1 235159706 235159714 LBX1 JASPAR yes 36343858
chr1 235159706 235159714 LHX9 JASPAR yes 36343859
chr1 235159706 235159714 MSX1 JASPAR yes 36343860
chr1 235159706 235159714 MSX2 JASPAR yes 36343861
chr1 235159706 235159714 NKX6-2 JASPAR yes 36343862
chr1 235159706 235159714 PRRX1 JASPAR yes 36343863
chr1 235159706 235159714 RAX2 JASPAR yes 36343864
chr1 235159706 235159714 SHOX JASPAR yes 36343865
chr1 235159706 235159714 UNCX JASPAR yes 36343866
chr1 235159706 235159716 HOXB13 JASPAR yes 36343867
Genes associated with rs142078874[chr1:235159710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More