EnhancerDB
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  3. rs142088472[chr17:80820382]
Enhancers that have rs142088472[chr17:80820382]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs142088472[chr17:80820382]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80820377 80820387 TBX21 JASPAR yes 56389037
chr17 80820377 80820388 TBX20 JASPAR yes 56389038
chr17 80820377 80820390 EOMES JASPAR yes 56389039
Genes associated with rs142088472[chr17:80820382], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More