EnhancerDB
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  3. rs142097675[chr16:88829701]
Enhancers that have rs142097675[chr16:88829701]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142097675[chr16:88829701]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88825532 88829851 POLR2A UCSC Txn Factor no Conserved 108223304
chr16 88827644 88830105 ZNF143 GTRD no Epithelial (MCF-7) 21736891
chr16 88827644 88830105 ZNF143 GTRD no Epithelial (MCF-7) 108223325
chr16 88828523 88830154 TCF7L2 GTRD no Colon (HCT116) 21736892
chr16 88828523 88830154 TCF7L2 GTRD no Colon (HCT116) 108223326
chr16 88829382 88830185 TCF7L2 GTRD no Colon (HCT116) 21736893
chr16 88829382 88830185 TCF7L2 GTRD no Colon (HCT116) 108223327
chr16 88829653 88829987 TCF7L2 GTRD no Colon (HCT116) 21736894
chr16 88829653 88829987 TCF7L2 GTRD no Colon (HCT116) 108223328
chr16 88829695 88829701 SP1 TRANSFAC yes 12301298
chr16 88829696 88829701 SP1 TRANSFAC yes 12301299
chr16 88829699 88829711 TFAP2A JASPAR yes 12301300
chr16 88829699 88829711 TFAP2B JASPAR yes 12301301
chr16 88829699 88829711 TFAP2C JASPAR yes 12301302
chr16 88829700 88829711 TFAP2B JASPAR yes 12301303
chr16 88829700 88829711 TFAP2C JASPAR yes 12301304
Genes associated with rs142097675[chr16:88829701], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More