EnhancerDB
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  3. rs142112160[chr1:226892109]
Enhancers that have rs142112160[chr1:226892109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142112160[chr1:226892109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226891069 226892789 TCF7L2 GTRD no Colon (HCT116) 21387253
chr1 226891069 226892789 TCF7L2 GTRD no Colon (HCT116) 107876298
chr1 226892108 226892118 NFKB1 JASPAR yes 35835699
Genes associated with rs142112160[chr1:226892109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More