EnhancerDB
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  3. rs142143482[chr1:19738148]
Enhancers that have rs142143482[chr1:19738148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142143482[chr1:19738148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19738145 19738155 GBX2 JASPAR yes 27186987
chr1 19738145 19738155 MNX1 JASPAR yes 27186988
chr1 19738145 19738155 RAX JASPAR yes 27186989
chr1 19738145 19738156 HOXA10 JASPAR yes 27186990
chr1 19738146 19738154 BARX1 JASPAR yes 27186991
chr1 19738146 19738154 BSX JASPAR yes 27186992
chr1 19738146 19738154 ISL2 JASPAR yes 27186993
chr1 19738146 19738154 LMX1B JASPAR yes 27186994
chr1 19738146 19738154 MSX1 JASPAR yes 27186995
chr1 19738146 19738154 MSX2 JASPAR yes 27186996
Genes associated with rs142143482[chr1:19738148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More