EnhancerDB
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  3. rs142165354[chr1:203520591]
Enhancers that have rs142165354[chr1:203520591]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs142165354[chr1:203520591]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203518614 203520743 ZBTB33 GTRD no Brain (SK-N-SH) 21369441
chr1 203518802 203522161 ZNF274 GTRD no Cervix (HeLa-S3) 21369442
chr1 203518877 203522236 ZBTB33 GTRD no Brain (SK-N-SH) 21369443
chr1 203518928 203520793 ZBTB33 GTRD no Brain (SK-N-SH) 21369444
chr1 203519232 203521926 ZBTB33 GTRD no Brain (SK-N-SH) 21369457
chr1 203519275 203521022 ZNF274 GTRD no Cervix (HeLa-S3) 21369460
chr1 203519297 203521969 ZNF274 GTRD no Cervix (HeLa-S3) 21369462
chr1 203519983 203520939 ZNF274 GTRD no Cervix (HeLa-S3) 21369468
chr1 203520219 203521899 ZBTB33 GTRD no Brain (SK-N-SH) 21369469
chr1 203520228 203520879 ZNF274 GTRD no Cervix (HeLa-S3) 21369470
chr1 203520228 203520897 ZNF274 GTRD no Cervix (HeLa-S3) 21369471
chr1 203520258 203520889 ZNF274 GTRD no Cervix (HeLa-S3) 21369472
chr1 203520302 203520871 ZNF274 GTRD no Cervix (HeLa-S3) 21369473
chr1 203520319 203520831 ZBTB33 GTRD no Lung (A549) 21369474
chr1 203520343 203521201 ZNF274 GTRD no Cervix (HeLa-S3) 21369475
chr1 203520582 203520597 MEF2C JASPAR yes 34638980
chr1 203520589 203520604 MEF2A JASPAR yes 34638981
chr1 203520590 203520605 MEF2C JASPAR yes 34638982
chr1 203520591 203520603 MEF2A JASPAR yes 34638983
chr1 203520591 203520603 MEF2B JASPAR yes 34638984
chr1 203520591 203520603 MEF2D JASPAR yes 34638985
Genes associated with rs142165354[chr1:203520591], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More