EnhancerDB
  1. Home
  2. SNP
  3. rs142180143[chr16:88825904]
Enhancers that have rs142180143[chr16:88825904]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142180143[chr16:88825904]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 21736869
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 108223300
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 21736870
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 108223301
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 21736871
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 108223302
chr16 88825512 88827616 ZNF143 GTRD no Epithelial (MCF-7) 21736872
chr16 88825512 88827616 ZNF143 GTRD no Epithelial (MCF-7) 108223303
chr16 88825532 88829851 POLR2A UCSC Txn Factor no Conserved 108223304
chr16 88825564 88827599 ZNF143 GTRD no Epithelial (MCF-7) 21736873
chr16 88825564 88827599 ZNF143 GTRD no Epithelial (MCF-7) 108223305
chr16 88825575 88827571 ZNF143 GTRD no Epithelial (MCF-7) 21736874
chr16 88825575 88827571 ZNF143 GTRD no Epithelial (MCF-7) 108223306
chr16 88825699 88826980 AR GTRD no Prostate (PC-3) 21736875
chr16 88825699 88826980 AR GTRD no Prostate (PC-3) 108223307
chr16 88825872 88826971 ZBTB33 GTRD no Lung (A549) 108223308
chr16 88825886 88825907 IRF1 JASPAR yes 12300651
chr16 88825890 88825904 STAT1 JASPAR yes 12300652
chr16 88825890 88825905 PRDM1 JASPAR yes 12300653
chr16 88825890 88825905 STAT2 JASPAR yes 12300654
chr16 88825890 88825908 IRF2 JASPAR yes 12300655
chr16 88825894 88825909 IRF9 JASPAR yes 12300656
chr16 88825895 88825909 IRF8 JASPAR yes 12300657
chr16 88825895 88825909 ONECUT2 JASPAR yes 12300658
chr16 88825895 88825909 ONECUT3 JASPAR yes 12300659
chr16 88825899 88825914 MYBL2 JASPAR yes 12300660
chr16 88825904 88825912 FOXG1 JASPAR yes 12300661
chr16 88825904 88825924 TP53 JASPAR yes 12300662
Genes associated with rs142180143[chr16:88825904], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More