EnhancerDB
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  3. rs142190491[chr1:173383011]
Enhancers that have rs142190491[chr1:173383011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs142190491[chr1:173383011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173382173 173383654 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846680
chr1 173382173 173383663 POLR2A UCSC Txn Factor no Conserved 107846681
chr1 173382933 173383031 ZNF274 GTRD no Bone Marrow (K562) 21351284
chr1 173382933 173383033 ZNF274 GTRD no Bone Marrow (K562) 21351285
chr1 173383001 173383015 SPI1 JASPAR yes 33197131
Genes associated with rs142190491[chr1:173383011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More