EnhancerDB
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  3. rs142193552[chr6:42295822]
Enhancers that have rs142193552[chr6:42295822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42275585 42296471 enh9113
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs142193552[chr6:42295822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42295810 42295824 TLX1 JASPAR yes 101709529
chr6 42295810 42295828 ESR2 JASPAR yes 101709530
chr6 42295811 42295828 ESR1 JASPAR yes 101709531
chr6 42295814 42295835 ZNF263 JASPAR yes 101709532
chr6 42295821 42295833 HINFP JASPAR yes 101709533
Genes associated with rs142193552[chr6:42295822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More