EnhancerDB
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  3. rs142201945[chr5:172205373]
Enhancers that have rs142201945[chr5:172205373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172205264 172205447 vista50168
VISTA
Transcript factors that have rs142201945[chr5:172205373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172204315 172205790 POLR2A UCSC Txn Factor no Conserved 108537492
chr5 172205194 172205478 FOS UCSC Txn Factor no Conserved 108537493
chr5 172205207 172205487 JUND UCSC Txn Factor no Conserved 108537494
chr5 172205235 172205475 FOSL2 UCSC Txn Factor no Conserved 108537495
chr5 172205363 172205381 ESR1 JASPAR yes 67825357
chr5 172205363 172205381 ESR1 JASPAR yes 70763111
chr5 172205371 172205385 ZIC1 JASPAR yes 67825358
chr5 172205371 172205385 ZIC1 JASPAR yes 70763112
chr5 172205371 172205386 ZIC3 JASPAR yes 67825359
chr5 172205371 172205386 ZIC4 JASPAR yes 67825360
chr5 172205371 172205386 ZIC3 JASPAR yes 70763113
chr5 172205371 172205386 ZIC4 JASPAR yes 70763114
Genes associated with rs142201945[chr5:172205373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More