EnhancerDB
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  3. rs142225256[chr1:226856609]
Enhancers that have rs142225256[chr1:226856609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142225256[chr1:226856609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226856600 226856618 IRF2 JASPAR yes 35830242
chr1 226856608 226856611 MYB TRANSFAC yes 35830243
chr1 226856608 226856622 RXRB JASPAR yes 35830244
chr1 226856608 226856622 RXRG JASPAR yes 35830245
chr1 226856608 226856623 NR2C2 JASPAR yes 35830246
chr1 226856609 226856624 PRDM1 JASPAR yes 35830247
Genes associated with rs142225256[chr1:226856609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More