EnhancerDB
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  3. rs142228000[chr1:235094672]
Enhancers that have rs142228000[chr1:235094672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142228000[chr1:235094672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235092848 235094748 ZNF274 GTRD no Cervix (HeLa-S3) 21401232
chr1 235092895 235094711 ZNF274 GTRD no Bone Marrow (K562) 21401234
chr1 235092973 235094822 ZNF274 GTRD no Bone Marrow (K562) 21401251
chr1 235092991 235094753 ZNF274 GTRD no Cervix (HeLa-S3) 21401256
chr1 235093217 235094828 ZNF143 GTRD no Epithelial (MCF-7) 21401361
chr1 235094667 235094673 SP1 TRANSFAC yes 36334727
chr1 235094667 235094677 SP1 JASPAR yes 36334728
chr1 235094669 235094674 SP1 TRANSFAC yes 36334729
chr1 235094672 235094680 SP1 TRANSFAC yes 36334730
Genes associated with rs142228000[chr1:235094672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More