EnhancerDB
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  3. rs142253327[chr12:46609835]
Enhancers that have rs142253327[chr12:46609835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
chr12 46609835 46610258 vista13215
VISTA
Transcript factors that have rs142253327[chr12:46609835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 21541050
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026933
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026934
chr12 46609114 46609838 GATA3 GTRD no Thymus 21541068
chr12 46609114 46609838 GATA3 GTRD no Thymus 108026964
chr12 46609114 46609838 GATA3 GTRD no Thymus 108026965
chr12 46609825 46609846 ZNF263 JASPAR yes 82394389
chr12 46609825 46609846 ZNF263 JASPAR yes 120604339
Genes associated with rs142253327[chr12:46609835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More