EnhancerDB
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  3. rs142262488[chr1:203518606]
Enhancers that have rs142262488[chr1:203518606]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs142262488[chr1:203518606]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203518320 203518946 SOX2 GTRD no Neural Stem Cells (H9) 21369439
chr1 203518438 203518808 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369440
chr1 203518602 203518622 RREB1 JASPAR yes 34638659
chr1 203518603 203518623 RREB1 JASPAR yes 34638660
chr1 203518604 203518624 RREB1 JASPAR yes 34638661
chr1 203518605 203518625 RREB1 JASPAR yes 34638662
chr1 203518606 203518627 ZNF263 JASPAR yes 34638663
Genes associated with rs142262488[chr1:203518606], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More