EnhancerDB
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  3. rs142271120[chr12:46840027]
Enhancers that have rs142271120[chr12:46840027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142271120[chr12:46840027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46839712 46840611 ZNF143 GTRD no Epithelial (MCF-7) 21541676
chr12 46839719 46840679 ZNF143 GTRD no Epithelial (MCF-7) 21541677
chr12 46839791 46840641 ZNF143 GTRD no Epithelial (MCF-7) 21541678
chr12 46839804 46840698 ZNF143 GTRD no Epithelial (MCF-7) 21541679
chr12 46839806 46840655 ZNF274 GTRD no Liver (HepG2) 21541680
chr12 46839808 46840718 ZNF143 GTRD no Epithelial (MCF-7) 21541681
chr12 46839819 46840528 ZNF274 GTRD no Liver (HepG2) 21541682
chr12 46839820 46840531 ZNF143 GTRD no Epithelial (MCF-7) 21541683
chr12 46839825 46840471 ZNF143 GTRD no Epithelial (MCF-7) 21541684
chr12 46839829 46840564 ZNF143 GTRD no Epithelial (MCF-7) 21541685
chr12 46839832 46840631 ZNF143 GTRD no Epithelial (MCF-7) 21541686
chr12 46839842 46840416 ZNF143 GTRD no Epithelial (MCF-7) 21541687
chr12 46839852 46840545 ZNF143 GTRD no Epithelial (MCF-7) 21541688
chr12 46839860 46840530 ZNF274 GTRD no Liver (HepG2) 21541689
chr12 46839862 46840495 ZNF143 GTRD no Epithelial (MCF-7) 21541690
chr12 46839882 46840448 ZNF143 GTRD no Epithelial (MCF-7) 21541691
chr12 46839897 46840697 ZNF274 GTRD no Liver (HepG2) 21541692
chr12 46839901 46840528 ZNF274 GTRD no Liver (HepG2) 21541693
chr12 46839910 46840474 ZNF274 GTRD no Liver (HepG2) 21541694
chr12 46839948 46840596 ZNF274 GTRD no Liver (HepG2) 21541695
chr12 46839961 46840416 ZNF274 GTRD no Liver (HepG2) 21541696
chr12 46839977 46840413 ZNF274 GTRD no Liver (HepG2) 21541697
chr12 46839985 46840590 ZNF274 GTRD no Liver (HepG2) 21541698
chr12 46839990 46840524 ZNF143 GTRD no Epithelial (MCF-7) 21541699
chr12 46839992 46840579 ZNF143 GTRD no Epithelial (MCF-7) 21541700
chr12 46839998 46840432 ZNF274 GTRD no Liver (HepG2) 21541701
chr12 46840006 46840421 ZNF274 GTRD no Liver (HepG2) 21541702
chr12 46840015 46840486 ZNF274 GTRD no Liver (HepG2) 21541703
chr12 46840017 46840480 ZNF143 GTRD no Epithelial (MCF-7) 21541704
chr12 46840024 46840474 ZNF274 GTRD no Liver (HepG2) 21541705
chr12 46840025 46840030 GATA2 JASPAR yes 120621911
Genes associated with rs142271120[chr12:46840027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More