EnhancerDB
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  3. rs142295152[chr1:235116421]
Enhancers that have rs142295152[chr1:235116421]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142295152[chr1:235116421]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235113519 235117302 POLR2A UCSC Txn Factor no Conserved 107885189
chr1 235113678 235117302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402321
chr1 235113678 235117302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885192
chr1 235116086 235116770 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402502
chr1 235116089 235116613 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402503
chr1 235116138 235116518 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402504
chr1 235116140 235116520 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402505
chr1 235116188 235116624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402506
chr1 235116215 235116731 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402507
chr1 235116220 235116750 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402508
chr1 235116221 235116657 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402509
chr1 235116224 235116448 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402510
chr1 235116225 235116661 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402511
chr1 235116228 235116664 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402512
chr1 235116229 235116773 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402513
chr1 235116253 235117086 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402514
chr1 235116263 235116539 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402515
chr1 235116292 235116796 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402516
chr1 235116303 235116563 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402517
chr1 235116309 235116533 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402518
chr1 235116330 235116726 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402519
chr1 235116343 235116863 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402520
chr1 235116351 235116530 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402521
chr1 235116355 235116911 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402522
chr1 235116373 235117059 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402523
chr1 235116384 235116777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402524
chr1 235116390 235116470 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402525
chr1 235116405 235116805 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402526
chr1 235116406 235117002 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402527
chr1 235116412 235116423 ESRRA JASPAR yes 36337829
chr1 235116412 235116423 ESRRB JASPAR yes 36337830
chr1 235116412 235116425 NR2F1 JASPAR yes 36337831
chr1 235116413 235116431 ESR2 JASPAR yes 36337832
chr1 235116414 235116432 RARA JASPAR yes 36337833
chr1 235116415 235116430 ESR2 JASPAR yes 36337834
chr1 235116416 235116680 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402528
Genes associated with rs142295152[chr1:235116421], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More