EnhancerDB
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  3. rs142308220[chr1:171391864]
Enhancers that have rs142308220[chr1:171391864]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs142308220[chr1:171391864]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171391850 171391865 NFYB JASPAR yes 33078771
chr1 171391852 171391868 NFYA JASPAR yes 33078772
chr1 171391853 171391871 NFYA JASPAR yes 33078773
chr1 171391864 171391878 SPIC JASPAR yes 33078778
Genes associated with rs142308220[chr1:171391864], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More