EnhancerDB
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Enhancers that have rs142327568[chr17:78639290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs142327568[chr17:78639290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78639270 78639291 ZNF263 JASPAR yes 56264948
chr17 78639272 78639293 IRF1 JASPAR yes 56264949
chr17 78639275 78639296 ZNF263 JASPAR yes 56264953
chr17 78639277 78639298 IRF1 JASPAR yes 56264954
chr17 78639279 78639294 PRDM1 JASPAR yes 56264956
chr17 78639279 78639294 STAT2 JASPAR yes 56264957
chr17 78639280 78639301 ZNF263 JASPAR yes 56264958
chr17 78639282 78639303 IRF1 JASPAR yes 56264959
chr17 78639284 78639299 PRDM1 JASPAR yes 56264961
chr17 78639284 78639299 STAT2 JASPAR yes 56264962
chr17 78639287 78639308 IRF1 JASPAR yes 56264963
chr17 78639289 78639294 ETS2 TRANSFAC yes 56264964
chr17 78639289 78639304 PRDM1 JASPAR yes 56264965
Genes associated with rs142327568[chr17:78639290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More