EnhancerDB
  1. Home
  2. SNP
  3. rs142340428[chr1:235136949]
Enhancers that have rs142340428[chr1:235136949]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs142340428[chr1:235136949]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235136933 235136950 ESR1 JASPAR yes 36340553
chr1 235136948 235136958 ID4 JASPAR yes 36340555
chr1 235136948 235136958 TCF3 JASPAR yes 36340556
chr1 235136948 235136958 TCF4 JASPAR yes 36340557
chr1 235136949 235136958 SNAI2 JASPAR yes 36340558
Genes associated with rs142340428[chr1:235136949], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More