EnhancerDB
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  3. rs142345426[chr16:85219920]
Enhancers that have rs142345426[chr16:85219920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142345426[chr16:85219920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85219078 85220948 ZNF143 GTRD no Epithelial (MCF-7) 21720572
chr16 85219228 85220950 ZNF143 GTRD no Epithelial (MCF-7) 21720573
chr16 85219284 85220792 ZNF143 GTRD no Epithelial (MCF-7) 21720574
chr16 85219365 85220968 ZNF143 GTRD no Epithelial (MCF-7) 21720575
chr16 85219371 85220804 ZNF143 GTRD no Epithelial (MCF-7) 21720576
chr16 85219373 85220976 ZNF143 GTRD no Epithelial (MCF-7) 21720577
chr16 85219408 85220930 ZNF274 GTRD no Liver (HepG2) 21720578
chr16 85219502 85220983 ZNF274 GTRD no Liver (HepG2) 21720579
chr16 85219531 85220942 ZNF143 GTRD no Epithelial (MCF-7) 21720580
chr16 85219535 85221509 ZNF143 GTRD no Epithelial (MCF-7) 21720581
chr16 85219578 85220940 ZNF143 GTRD no Epithelial (MCF-7) 21720582
chr16 85219630 85221039 ZNF143 GTRD no Epithelial (MCF-7) 21720584
chr16 85219717 85220972 ZNF143 GTRD no Epithelial (MCF-7) 21720585
chr16 85219725 85221344 TCF7L2 GTRD no Colon (HCT116) 21720586
chr16 85219744 85221698 ZNF143 GTRD no Epithelial (MCF-7) 21720587
chr16 85219832 85220943 ZBTB33 GTRD no Brain (SK-N-SH) 21720588
chr16 85219841 85220914 ZNF143 GTRD no Epithelial (MCF-7) 21720589
chr16 85219846 85220892 ZBTB33 GTRD no Brain (SK-N-SH) 21720590
chr16 85219852 85220940 ZBTB33 GTRD no Brain (SK-N-SH) 21720591
chr16 85219857 85221576 ZBTB33 GTRD no Brain (SK-N-SH) 21720592
chr16 85219867 85220893 ZNF143 GTRD no Epithelial (MCF-7) 21720593
chr16 85219880 85221314 TCF7L2 GTRD no Colon (HCT116) 21720594
chr16 85219909 85219924 HNF1A JASPAR yes 12029768
chr16 85219910 85219923 HNF1B JASPAR yes 12029769
chr16 85219910 85219926 POU4F3 JASPAR yes 12029770
chr16 85219913 85219923 GSX2 JASPAR yes 12029771
chr16 85219913 85219923 HOXB2 JASPAR yes 12029772
chr16 85219913 85219923 HOXB3 JASPAR yes 12029773
chr16 85219913 85219923 MNX1 JASPAR yes 12029774
chr16 85219913 85219923 POU6F1 JASPAR yes 12029775
chr16 85219913 85219924 HOXA10 JASPAR yes 12029776
chr16 85219913 85220650 ZNF143 GTRD no Epithelial (MCF-7) 21720595
chr16 85219914 85219922 LMX1A JASPAR yes 12029777
chr16 85219914 85219922 LMX1B JASPAR yes 12029778
chr16 85219914 85219922 NKX6-1 JASPAR yes 12029779
chr16 85219914 85219922 NKX6-2 JASPAR yes 12029780
chr16 85219914 85219922 VAX1 JASPAR yes 12029781
chr16 85219914 85219922 VAX2 JASPAR yes 12029782
chr16 85219914 85219922 VSX1 JASPAR yes 12029783
chr16 85219914 85219922 VSX2 JASPAR yes 12029784
chr16 85219919 85219925 TBP TRANSFAC yes 12029785
Genes associated with rs142345426[chr16:85219920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More