EnhancerDB
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  3. rs142345893[chr5:148947215]
Enhancers that have rs142345893[chr5:148947215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148937365 148947295 enh8790
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142345893[chr5:148947215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148947207 148947217 BARHL2 JASPAR yes 66825463
chr5 148947208 148947222 IRF7 JASPAR yes 66825464
chr5 148947213 148947217 YY1 TRANSFAC yes 66825465
Genes associated with rs142345893[chr5:148947215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More