EnhancerDB
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  3. rs142347642[chr18:55882047]
Enhancers that have rs142347642[chr18:55882047]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs142347642[chr18:55882047]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55882026 55882047 IRF1 JASPAR yes 110927776
chr18 55882027 55882048 IRF1 JASPAR yes 110927777
chr18 55882028 55882049 IRF1 JASPAR yes 110927778
chr18 55882031 55882052 IRF1 JASPAR yes 110927782
chr18 55882032 55882047 FOXP1 JASPAR yes 110927783
chr18 55882032 55882053 IRF1 JASPAR yes 110927784
chr18 55882033 55882048 FOXP1 JASPAR yes 110927785
chr18 55882033 55882053 RREB1 JASPAR yes 110927786
chr18 55882033 55882054 IRF1 JASPAR yes 110927787
chr18 55882034 55882049 FOXP1 JASPAR yes 110927788
chr18 55882035 55882050 FOXP1 JASPAR yes 110927789
chr18 55882036 55882051 FOXP1 JASPAR yes 110927790
chr18 55882036 55882056 RREB1 JASPAR yes 110927791
chr18 55882037 55882052 FOXP1 JASPAR yes 110927792
chr18 55882038 55882053 FOXP1 JASPAR yes 110927793
chr18 55882041 55882061 RREB1 JASPAR yes 110927794
chr18 55882045 55882051 TCF4 TRANSFAC yes 110927795
Genes associated with rs142347642[chr18:55882047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More