EnhancerDB
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  3. rs142354382[chr2:39722097]
Enhancers that have rs142354382[chr2:39722097]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39706845 39747255 enh5443
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
chr2 39722003 39722381 vista31145
VISTA
Transcript factors that have rs142354382[chr2:39722097]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39721862 39722111 RUNX3 UCSC Txn Factor no Conserved 108431945
chr2 39722080 39722097 RARA JASPAR yes 22039505
chr2 39722080 39722097 RARA JASPAR yes 73208007
chr2 39722092 39722106 ZIC1 JASPAR yes 22039506
chr2 39722092 39722106 ZIC1 JASPAR yes 73208008
chr2 39722093 39722104 EBF1 JASPAR yes 22039507
chr2 39722093 39722104 EBF1 JASPAR yes 73208009
Genes associated with rs142354382[chr2:39722097], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More