EnhancerDB
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  3. rs142354535[chr1:19731979]
Enhancers that have rs142354535[chr1:19731979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142354535[chr1:19731979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19731972 19731982 FIGLA JASPAR yes 27186191
chr1 19731972 19731982 MSC JASPAR yes 27186192
chr1 19731972 19731982 SREBF2 JASPAR yes 27186193
chr1 19731972 19731982 TFAP4 JASPAR yes 27186194
chr1 19731973 19731982 SNAI2 JASPAR yes 27186195
chr1 19731974 19731979 USF2 TRANSFAC yes 27186196
Genes associated with rs142354535[chr1:19731979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More