EnhancerDB
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  3. rs142377955[chr17:55990621]
Enhancers that have rs142377955[chr17:55990621]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142377955[chr17:55990621]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55990616 55990621 SP1 TRANSFAC yes 54998441
chr17 55990616 55990628 HINFP JASPAR yes 54998442
chr17 55990621 55990638 ESR1 JASPAR yes 54998443
chr17 55990621 55990639 ESR2 JASPAR yes 54998444
Genes associated with rs142377955[chr17:55990621], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More