EnhancerDB
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  3. rs142388805[chr12:52518885]
Enhancers that have rs142388805[chr12:52518885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs142388805[chr12:52518885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52518275 52519891 AR GTRD no Prostate (PC-3) 21546230
chr12 52518873 52518885 INSM1 JASPAR yes 120919400
chr12 52518873 52518887 RXRG JASPAR yes 120919401
chr12 52518873 52518888 NR2C2 JASPAR yes 120919402
chr12 52518876 52518889 NR2F1 JASPAR yes 120919403
chr12 52518885 52518891 MZF1 JASPAR yes 120919404
Genes associated with rs142388805[chr12:52518885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More