EnhancerDB
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  3. rs142423911[chr12:46604173]
Enhancers that have rs142423911[chr12:46604173]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs142423911[chr12:46604173]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46603615 46604299 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541017
chr12 46603615 46604299 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026887
chr12 46603741 46604311 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21541035
chr12 46603741 46604311 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108026910
chr12 46603767 46604209 ZNF274 GTRD no Liver (HepG2) 108026913
chr12 46603807 46604183 ZNF143 GTRD no Epithelial (MCF-7) 21541045
chr12 46603807 46604183 ZNF143 GTRD no Epithelial (MCF-7) 108026924
chr12 46603867 46604337 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21541048
chr12 46603867 46604337 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108026927
chr12 46603926 46605045 ZNF143 GTRD no Epithelial (MCF-7) 21541049
chr12 46603926 46605045 ZNF143 GTRD no Epithelial (MCF-7) 108026928
chr12 46604163 46604174 FOXA1 JASPAR yes 120603503
chr12 46604165 46604177 FOXI1 JASPAR yes 120603504
Genes associated with rs142423911[chr12:46604173], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More