EnhancerDB
  1. Home
  2. SNP
  3. rs142454249[chr2:232519579]
Enhancers that have rs142454249[chr2:232519579]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142454249[chr2:232519579]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232519572 232519584 HES5 JASPAR yes 81732088
chr2 232519572 232519584 HES7 JASPAR yes 81732089
chr2 232519572 232519588 T JASPAR yes 81732090
chr2 232519573 232519583 BHLHE40 JASPAR yes 81732091
chr2 232519573 232519583 BHLHE41 JASPAR yes 81732092
chr2 232519573 232519583 HEY1 JASPAR yes 81732093
chr2 232519573 232519583 HEY2 JASPAR yes 81732094
chr2 232519573 232519583 MAX JASPAR yes 81732095
chr2 232519573 232519583 MNT JASPAR yes 81732096
chr2 232519573 232519583 TFE3 JASPAR yes 81732097
chr2 232519573 232519583 TFEB JASPAR yes 81732098
chr2 232519575 232519580 MYC TRANSFAC yes 81732099
chr2 232519575 232519580 USF1 TRANSFAC yes 81732100
chr2 232519575 232519580 USF2 TRANSFAC yes 81732101
Genes associated with rs142454249[chr2:232519579], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More