EnhancerDB
  1. Home
  2. SNP
  3. rs142493140[chr5:77806555]
Enhancers that have rs142493140[chr5:77806555]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs142493140[chr5:77806555]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77806548 77806563 STAT1 JASPAR yes 63594555
chr5 77806550 77806561 STAT1 JASPAR yes 63594556
chr5 77806550 77806561 STAT3 JASPAR yes 63594557
chr5 77806553 77806563 NFATC3 JASPAR yes 63594558
chr5 77806555 77806562 NFATC2 JASPAR yes 63594559
Genes associated with rs142493140[chr5:77806555], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More