EnhancerDB
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  3. rs142503843[chr17:2121328]
Enhancers that have rs142503843[chr17:2121328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142503843[chr17:2121328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2121311 2121332 IRF1 JASPAR yes 52738760
chr17 2121312 2121333 IRF1 JASPAR yes 52738761
chr17 2121313 2121333 RREB1 JASPAR yes 52738762
chr17 2121314 2121328 IRF7 JASPAR yes 52738763
chr17 2121316 2121331 FOXP1 JASPAR yes 52738764
chr17 2121317 2121338 IRF1 JASPAR yes 52738765
chr17 2121318 2121333 FOXP1 JASPAR yes 52738766
chr17 2121318 2121339 IRF1 JASPAR yes 52738767
chr17 2121321 2121336 FOXP1 JASPAR yes 52738768
chr17 2121323 2121338 FOXP1 JASPAR yes 52738769
chr17 2121325 2121337 FOXC2 JASPAR yes 52738770
chr17 2121326 2121340 ONECUT3 JASPAR yes 52738771
chr17 2121328 2121337 SRY JASPAR yes 52738772
Genes associated with rs142503843[chr17:2121328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More