EnhancerDB
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  3. rs142516073[chr12:125178360]
Enhancers that have rs142516073[chr12:125178360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142516073[chr12:125178360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125178039 125178754 TCF7L2 GTRD no Colon (HCT116) 21581757
chr12 125178094 125178550 ZNF143 GTRD no Epithelial (MCF-7) 21581758
chr12 125178102 125178653 ZNF274 GTRD no Bone Marrow (K562) 21581759
chr12 125178139 125178625 ZNF274 GTRD no Bone Marrow (K562) 21581760
chr12 125178140 125178707 ZBTB33 GTRD no Lung (A549) 21581761
chr12 125178143 125178693 ZBTB33 GTRD no Lung (A549) 21581762
chr12 125178159 125178723 ZNF274 GTRD no Bone Marrow (K562) 21581763
chr12 125178160 125178667 ZNF274 GTRD no Cervix (HeLa-S3) 21581764
chr12 125178208 125178510 ZNF274 GTRD no Liver (HepG2) 21581765
chr12 125178209 125178634 ZNF274 GTRD no Blood (GM12878) 21581766
chr12 125178243 125178509 ZNF274 GTRD no Liver (HepG2) 21581767
chr12 125178243 125178679 ZNF274 GTRD no Bone Marrow (K562) 21581768
chr12 125178245 125178593 ZBTB33 GTRD no Brain (SK-N-SH) 21581769
chr12 125178247 125178657 ZNF274 GTRD no Blood (GM12878) 21581770
chr12 125178278 125178542 ZBTB33 GTRD no Lung (A549) 21581771
chr12 125178357 125178368 EBF1 JASPAR yes 124409607
Genes associated with rs142516073[chr12:125178360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More