EnhancerDB
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  3. rs142528994[chr1:154390708]
Enhancers that have rs142528994[chr1:154390708]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142528994[chr1:154390708]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154390691 154392004 P63 GTRD no Skin (Keratinocyte) 21340388
chr1 154390691 154392004 P63 GTRD no Skin (Keratinocyte) 107832545
chr1 154390706 154390720 TLX1 JASPAR yes 32290243
chr1 154390706 154392011 P63 GTRD no Skin (Keratinocyte) 21340389
chr1 154390706 154392011 P63 GTRD no Skin (Keratinocyte) 107832546
Genes associated with rs142528994[chr1:154390708], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More